Abstract:
A trim distance as a phylogeny-based distance between two positions in nucleotide sequences is formulated as an LCA-preserving distance between the trimmed phylogenetic t...Show MoreMetadata
Abstract:
A trim distance as a phylogeny-based distance between two positions in nucleotide sequences is formulated as an LCA-preserving distance between the trimmed phylogenetic trees by the positions. In this paper, in order to investigate the positions as packaging signals of nucleotide sequences in influenza A (H3N2) viruses, we compute and compare the trim distances between positions in the nucleotide sequences of influenza A (H3N2) viruses provided from NCBI.
Date of Conference: 20-24 November 2012
Date Added to IEEE Xplore: 22 April 2013
ISBN Information:
Graduate School of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Japan
Graduate School of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Japan
Department of Artificial Intelligence & Biomedical Informatics R&D Center, Kyushu Institute of Technology, Iizuka, Japan
Department of Computer Bioscience, Nagahama Institute of Bio-Science and Technology, Nagahama, Japan
Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan
Contents Graduate School of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Japan
Graduate School of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Japan
Department of Artificial Intelligence & Biomedical Informatics R&D Center, Kyushu Institute of Technology, Iizuka, Japan
Department of Computer Bioscience, Nagahama Institute of Bio-Science and Technology, Nagahama, Japan
Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan
