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Algorithmic complexity of motifs clusters superfamilies of networks | IEEE Conference Publication | IEEE Xplore

Algorithmic complexity of motifs clusters superfamilies of networks


Abstract:

Representing biological systems as networks has proved to be very powerful. For example, local graph analysis of substructures such as subgraph over representation (or mo...Show More

Abstract:

Representing biological systems as networks has proved to be very powerful. For example, local graph analysis of substructures such as subgraph over representation (or motifs) has elucidated different sub-types of networks. Here we report that using numerical approximations of Kolmogorov complexity, by means of algorithmic probability, clusters different classes of networks. For this, we numerically estimate the algorithmic probability of the sub-matrices from the adjacency matrix of the original network (hence including motifs). We conclude that algorithmic information theory is a powerful tool supplementing other network analysis techniques.
Date of Conference: 18-21 December 2013
Date Added to IEEE Xplore: 06 February 2014
Electronic ISBN:978-1-4799-1309-1
Conference Location: Shanghai, China

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