IEEE Transactions on Information Technology in Biomedicine

An increasing number of studies have profiled gene expressions in tumor specimens using distinct microarray plat forms and analysis techniques. One challenging task is to develop robust statistical models in order to integrate multi-platform findings. We compare some methodologies on the field with respect to estrogen receptor (ER) status, and focus on a unified-among platforms scale implemented b... View full abstract»

Gene expression data are expected to be of significant help in the development of efficient cancer diagnoses and classification platforms. In order to select a small subset of informative genes from the data for cancer classification, recently, many researchers are analyzing gene expression data using various computational intelligence methods. However, due to the small number of samples compared ... View full abstract»

Adverse drug events (ADEs) are a public health is sue. Their detection usually relies on voluntary reporting or medical chart reviews. The objective of this paper is to automatically detect cases of ADEs by data mining. 115 447 complete past hospital stays are extracted from six French, Danish, and Bulgarian hospitals using a common data model including diagnoses, drug administrations, laboratory ... View full abstract»

In this paper, a method is proposed to compress multi-channel electroencephalographic (EEG) signals in a scalable fashion. Correlation between EEG channels is exploited through clustering using a k-means method. Representative channels for each of the clusters are encoded individually while other channels are encoded differentially, i.e., with respect to their respective cluster representatives. T... View full abstract»

In this paper, features which are usually employed in automatic speech recognition (ASR) are used for the detection of seizures in newborn EEG. In particular, spectral envelope-based features, composed of spectral powers and their spectral derivatives are compared to the established feature set which has been previously developed for EEG analysis. The results indicate that the ASR features which m... View full abstract»

Increasing density of wireless communication and development of radio frequency identification (RFID) technology in particular have increased the susceptibility of patients equipped with cardiac rhythmic monitoring devices (CRMD) to environmental electro magnetic interference (EMI). Several organizations reported observing CRMD EMI from different sources. This paper focuses on mathematically analy... View full abstract»

This work is devoted to the evaluation of multilead digital wavelet transform (DWT)-based electrocardiogram (ECG) wave delineation algorithms, which were optimized and ported to a commercial wearable sensor platform. More specifically, we investigate the use of root-mean squared (RMS)-based multilead followed by a single-lead online delineation algorithm, which is based on a state-of-the-art offli... View full abstract»

Analyzing systolic time intervals-specifically the preejection-period (PEP)-is widely accepted as one of the few methods for the noninvasive assessment of cardiac contractility. In this paper, we investigated the ballistocardiogram (BCG) as a way to noninvasively measure myocardial contractility when combined with the ECG. Specifically, we derived a parameter from the BCG and ECG that we hypothesi... View full abstract»

In recent years, the increasing number of wearable devices on human has been witnessed as a trend. These devices can serve for many purposes: personal entertainment, communication, emergency mission, health care supervision, delivery, etc. Sharing information among the devices scattered across the human body requires a body area network (BAN) and body sensor network (BSN). However, implementation ... View full abstract»

The objective of this paper was to develop an agent based modeling framework in order to simulate the spread of influenza virus infection on a layout based on a representative hospital emergency department in Winnipeg, Canada. In doing so, the study complements mathematical modeling techniques for disease spread, as well as modeling applications focused on the spread of antibiotic-resistant nosoco... View full abstract»

We study the multiple access problem for e-Health applications (referred to as secondary users) coexisting with medical devices (referred to as primary or protected users) in a hospital environment. In particular, we focus on transmission scheduling and power control of secondary users in multiple spatial reuse time-division multiple access (STDMA) networks. The objective is to maximize the spectr... View full abstract»

In this paper, a computerized approach to segmenting prostate lesions in transrectal ultrasound (TRUS) images is presented. The segmentation of prostate lesions from TRUS images is very challenging due to issues, such as poor contrast, low SNRs, and irregular shape variations. To address these issues, a novel approach is employed to segment the lesions from the surrounding prostate, where region m... View full abstract»

Quantitative evaluation of the existing border-detection methods is commonly performed by using different metrics. This is inherently problematic due to the different characteristics of each metric. This paper presents a novel approach for objective evaluation of border-detection methods in dermoscopy images by introducing a comprehensive evaluation metric: optimized weighted performance index. Th... View full abstract»

This paper introduces a new unsharp masking (UM) scheme, called nonlinear UM (NLUM), for mammogram enhancement. The NLUM offers users the flexibility 1) to embed different types of filters into the nonlinear filtering operator; 2) to choose different linear or nonlinear operations for the fusion processes that combines the enhanced filtered portion of the mammogram with the original mammogram; and... View full abstract»

An automatic method for segmenting skin lesions in conventional macroscopic images is presented. The images are acquired with conventional cameras, without the use of a dermoscope. Automatic segmentation of skin lesions from macroscopic images is a very challenging problem due to factors such as illumination variations, irregular structural and color variations, the presence of hair, as well as th... View full abstract»