CLADE 2005. Proceedings Challenges of Large Applications in Distributed Environments, 2005.

24-24 July 2005

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  • Proceedings. Challenges of Large Applications in Distributed Environments

    Publication Year: 2005
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  • [Blank page]

    Publication Year: 2005, Page(s): 0_2
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  • Proceedings Challenges of Large Applications in Distributed Environments CLADE 2005 [Title]

    Publication Year: 2005, Page(s): i
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  • Copyright

    Publication Year: 2005, Page(s): ii
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  • Table of contents

    Publication Year: 2005, Page(s):iii - iv
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  • Welcome from the Workshop Chairs [CLADE 2005]

    Publication Year: 2005, Page(s): v
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  • Conference organization

    Publication Year: 2005, Page(s): vi
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  • Applications

    Publication Year: 2005, Page(s): 1
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  • [Breaker page]

    Publication Year: 2005, Page(s): 2
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  • GISolve: a grid-based problem solving environment for computationally intensive geographic information analysis

    Publication Year: 2005, Page(s):3 - 12
    Cited by:  Papers (1)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1491 KB) | HTML iconHTML

    The purpose of this paper is to demonstrate the design and implementation of GISolve - a grid-based problem solving environment for computationally intensive geographic information analysis based on geo-middleware. The geo-middleware resides between existing grid middleware and geographic information analysis applications to manage heterogeneous and dynamic resources on behalf of analysis applicat... View full abstract»

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  • Collaborative e-science architecture for Reaction Kinetics research community

    Publication Year: 2005, Page(s):13 - 22
    Cited by:  Papers (2)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1721 KB) | HTML iconHTML

    This paper presents a novel collaborative e-science architecture (CeSA) to address two challenging issues in e-science that arise from the management of heterogeneous distributed environments: (i) how to provide individual scientists an integrated environment to collaborate with each other in distributed, loosely coupled research communities where each member might be using a disparate range of to... View full abstract»

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  • Data Management

    Publication Year: 2005, Page(s): 23
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  • [Breaker page]

    Publication Year: 2005, Page(s): 24
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  • Coordination of data movement with computation scheduling on a cluster

    Publication Year: 2005, Page(s):25 - 34
    Cited by:  Papers (5)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1614 KB) | HTML iconHTML

    We are looking at the problem of scheduling compute tasks on a cluster of servers. These tasks require files that reside on a remote archive, and may also be cached on some subset of the servers. A task can only be run on a server that has the files it requires. This introduces the problem of scheduling data movement in coordination with the scheduling of computation. Our goal is to maximize throu... View full abstract»

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  • A composable data management architecture for scientific applications

    Publication Year: 2005, Page(s):35 - 44
    Cited by:  Patents (3)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1688 KB) | HTML iconHTML

    With ever increasing computational power, data management has become crucial for scientific applications today. Most on-going research efforts are dedicated to generalizing universal requirements and schemas for building generic data management systems. By closely studying a broad range of scientific applications including X-ray crystallography, radiation therapy, automated photometry and comparat... View full abstract»

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  • A user-transparent recoverable file system for distributed computing environment

    Publication Year: 2005, Page(s):45 - 53
    Cited by:  Papers (1)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1498 KB) | HTML iconHTML

    In a distributed computing environment, particularly grid, fault-tolerance is one of the core functionalities the system should provide. MPICH-GF is such a resilient system designed to resist external or internal failures, especially for message passing applications in the grid environment. But it does not stand the loss of a valuable resource: files. In a normal case, users open files and write d... View full abstract»

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  • [Breaker page]

    Publication Year: 2005, Page(s): 54
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  • Applications II: Bioinformatics

    Publication Year: 2005, Page(s): 55
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  • [Breaker page]

    Publication Year: 2005, Page(s): 56
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  • Challenges in large scale distributed computing: bioinformatics

    Publication Year: 2005, Page(s):57 - 65
    Cited by:  Papers (1)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1441 KB) | HTML iconHTML

    The amount of genomic data available for study is increasing at a rate similar to that of Moore's law. This deluge of data is challenging bioinformaticians to develop newer, faster and better algorithms for analysis and examination of this data. The growing availability of large scale computing grids coupled with high-performance networking is challenging computer scientists to develop better, fas... View full abstract»

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  • Simultaneous scheduling of replication and computation for bioinformatics applications on the grid

    Publication Year: 2005, Page(s):66 - 74
    Cited by:  Papers (7)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1447 KB) | HTML iconHTML

    One of the first motivations of using grids comes from applications managing large data sets infield such as high energy physics or life sciences. To improve the global throughput of software environments, replicas are usually put at wisely selected sites. Moreover, computation requests have to be scheduled among the available resources. To get the best performance, scheduling and data replication... View full abstract»

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  • Infrastructure and Services

    Publication Year: 2005, Page(s): 75
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  • [Breaker page]

    Publication Year: 2005, Page(s): 76
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  • Reverb: middleware for distributed application forensics

    Publication Year: 2005, Page(s):77 - 86
    Cited by:  Patents (1)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1869 KB) | HTML iconHTML

    We observe the recent research trend toward large-scale, component-based distributed systems that are dynamically configurable or extensible in response to changing execution environments or end-user needs. Regardless of whether these configuration changes happen automatically through predefined adaptation or self-management methods or in response to explicit user interaction, they can jeopardize ... View full abstract»

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  • Automatic selection of loop scheduling algorithms using reinforcement learning

    Publication Year: 2005, Page(s):87 - 94
    Cited by:  Papers (3)
    Request permission for reuse | Click to expandAbstract | PDF file iconPDF (1458 KB) | HTML iconHTML

    This paper presents the design and implementation of a reinforcement learning agent that automatically selects appropriate loop scheduling algorithms for parallel loops embedded in time-stepping scientific applications executing on clusters. There may be a number of such loops in an application, and the loops may have different load balancing requirements. Further, loop characteristics may also ch... View full abstract»

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