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A 2-D decomposition based parallelization of AIM for 3-D BIOEM problems | IEEE Conference Publication | IEEE Xplore

A 2-D decomposition based parallelization of AIM for 3-D BIOEM problems


Abstract:

A novel parallelization of the adaptive integral method (AIM) is presented for accelerating the large-scale solution of volume integral equations pertinent to bioelectrom...Show More

Abstract:

A novel parallelization of the adaptive integral method (AIM) is presented for accelerating the large-scale solution of volume integral equations pertinent to bioelectromagnetics (BIOEM) problems. The proposed method improves the parallel scalability of AIM by (i) using different workload distribution strategies to load balance the different steps of the algorithm (rather than a single global decomposition strategy) and (ii) using a 2-D rather than a 1-D stencil decomposition of the auxiliary grid to parallelize the 3-D FFTs and the related anterpolation/interpolation steps. With the proposed modifications, the maximum number of processes that can be used effectively scales as Pmax ∼ N2/3, where N denotes the number of volumetric unknowns. Numerical results demonstrate the scalability of the method and its application to BIOEM problems.
Date of Conference: 03-08 July 2011
Date Added to IEEE Xplore: 25 August 2011
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Conference Location: Spokane, WA, USA

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