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Signal Processing for Genomics, 2006. The Institution of Engineering and Technology Seminar on

Date Nov. 2006

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  • Covers

    Publication Year: 2006, Page(s): C1
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  • The Institution of Engineering and Technology Seminar on: Signal Processing for Genomics

    Publication Year: 2006, Page(s): nil2
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  • Copyright page

    Publication Year: 2006, Page(s):nil3 - nil4
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  • Announcements

    Publication Year: 2006, Page(s): nil5
    IEEE is not the copyright holder of this material | PDF file iconPDF (116 KB)
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  • Contents

    Publication Year: 2006, Page(s): nil6
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  • Programme

    Publication Year: 2006, Page(s): nil7
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  • Grid -Based Signal Processing and Search: Prospects for `Omic Data Analysis'

    Publication Year: 2006, Page(s): 1
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (38 KB)

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  • Modeling Gene Expression Data Using Probabalistic Boolean Networks (PSNs)

    Publication Year: 2006, Page(s):3 - 20
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (8850 KB)

    This paper models gene regulatory network from gene expression data using probabilistic Boolean network. View full abstract»

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  • Employing Bayesian Analysis in Pathway Modelling

    Publication Year: 2006, Page(s):21 - 22
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (172 KB)

    Biochemical pathway modelling and analysis relies on the development of mechanistic models describing the kinetics of the main chemical species implicated in the overall function of the pathway. Such mechanistic models are highly parameterised representations of the biological system where the model parameters correspond to, for example, actual kinetic reaction rates. Such kinetic rates for bioche... View full abstract»

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  • Bioinformatic Approaches to Improve the Identification of Peptides from Proteomics Experiments

    Publication Year: 2006, Page(s):23 - 45
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (6775 KB)

    The accurate analysis of the proteome using mass spectrometry plays an important role in the understanding of many of the physiological processes that occur in an organism and has become a standard tool used in the identification of proteins. This identification of proteins is a challenging one and relies upon bioinformatics tools to characterize proteins via their proteolytic peptides which are i... View full abstract»

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  • From the DNA Sequencer to a Sequence Assembly

    Publication Year: 2006, Page(s):47 - 60
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (4828 KB)

    Modern DNA sequencing instruments produce a variety of raw and processed output formats. Traditional Sanger style sequencing is well represented by the ABI sequencing instruments and so this is where most of the talk with be focused, however new emerging technologies from 454 Life Sciences and Solexa are discussed briefly too. It is not the aim to provide in-depth information on any one specific t... View full abstract»

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  • Funding Opportunities in BBSRC

    Publication Year: 2006, Page(s):61 - 83
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (3428 KB)

    BBSRC is a research council that aims to further the understanding of biological processes at the level of molecules and cells, as well as improve the knowledge of how organisms work and how they interact with each other in populations and ecological systems. This paper gives an overview how the council is structured, what are its funding opportunities and how to get funding from the council. View full abstract»

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  • Microarray Analysis - Problems and Potential Solutions

    Publication Year: 2006, Page(s):85 - 115
    Cited by:  Papers (4)
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (5551 KB)

    The explosion in sophisticated experimental techniques and hence in the potential biological information they provide has led to a paradigm shift in molecular biology. Pre-genomic biology followed, in general, a traditional hypothesis-driven approach, in which qualitative methods were applied to small sub-systems. In contrast to this modern post-genomic molecular biology takes a more holistic appr... View full abstract»

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  • Bayesian Hidden Markov Models for Detecting Regions of Deletion and Duplication in the Human Genome using Illumina BeadChip Arrays

    Publication Year: 2006, Page(s):117 - 137
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (6988 KB)

    The association of CNVs with disease is of interest in medical genetics. This paper makes use single nucleotide polymorphism (SNP) to infer copy number variation (CNV). A microrray technology known as SNP-CGH (SNP-comparative genomic hybridization) is used to detect DNA CNV. Current SNP-CGH arrays contain > 100, 000 probes. The Illumina BeadChip has been designed for whole genome SNP genotyping... View full abstract»

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  • Strategies and Tools for Multivariate Biology: Tackling High Dimensional Postgenomic Data

    Publication Year: 2006, Page(s):138 - 155
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (5397 KB)

    Postgenomic biology is characterised by large and diverse datasets presenting many technical challenges in data handling, analysis and integration. Further, there are significant challenges in converting the data into biological knowledge to support model building and hypothesis generation. A basic strategy is to find structure in the data (clusters) representing the coordinated response of system... View full abstract»

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  • Finding Characteristic Biology Patterns in Cancer Microarrays

    Publication Year: 2006, Page(s):156 - 166
    IEEE is not the copyright holder of this material | Click to expandAbstract | PDF file iconPDF (2390 KB)

    Genetic and environmental differences are known to affect gene expression. The natural variance of expression of many genes affects the control system in any tissue. A finite set of controls must respond to these perturbations, causing regular patterns of altered gene expression characteristic of the system. In order to examine these ideas, a simple method the summarise and test the observed patte... View full abstract»

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  • Covers

    Publication Year: 2006, Page(s): nil11
    IEEE is not the copyright holder of this material | PDF file iconPDF (417 KB)
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