Time-lapse microscopy-based genome wide RNAi screening in live human cells
Neumann, B.
Held, M.
Liebel, U.
Erfle, H.
Rogers, P.
Pepperkok, R.
Ellenberg, J.
MitoCheck Project Group, EMBL, Heidelberg;
This paper appears in: Biomedical Imaging: Nano to Macro, 2006. 3rd IEEE International Symposium on
Publication Date: 6-9 April 2006
On page(s): 245-246
Location: Arlington, VA,
ISBN: 0-7803-9576-X
INSPEC Accession Number: 9073101
Digital Object Identifier: 10.1109/ISBI.2006.1624898
Current Version Published: 2006-05-08
Abstract
Specific knock-down of gene expression by RNA interference is the method of choice to study gene function in human cells. A uniquely detailed phenotypic readout of such hypomorphs is possible by live cell microscopy of appropriate fluorescent reporter proteins. Here, I will present a fully automated method for RNAi screens in cultured human cells, combining reverse transfection by siRNA cell arrays, automated time-lapse fluorescence microscopy and computational phenotype analysis by image processing. The strategy is illustrated using an automatically scored mitosis assay and provides an easily scalable platform that we currently use in genome-wide RNAi screens for several cellular functions
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