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MarSelHR: A Haplotype Reconstruction System Using Linkage Disequilibrium

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2 Author(s)
Sang-Soo Yeo ; Dept. of Comput. Sci. & Commun. Eng., Kyushu Univ., Fukuoka ; Sung Kwon Kim

We propose MarSelHR, a haplotype reconstruction system, which is a combination of LD based block partitioning with Clark's algorithm. MarSelHR uses less CPU processing time than other haplotype reconstruction systems, and makes possible large-scale data processing using less memory through block unit processing. Furthermore, MarSelHR involves biological meaning through LD based partitioning and is able to result in more precise inference.

Published in:

Frontiers in the Convergence of Bioscience and Information Technologies, 2007. FBIT 2007

Date of Conference:

11-13 Oct. 2007