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Spatial index and visualization of protein structure

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4 Author(s)
Hui Li ; Dept. of Syst. & Comput. Sci., Howard Univ., Washington, DC, USA ; Chunmei Liu ; Burge, L. ; Southerland, W.

The generation of protein data is increasing exponentially with the rapid development of experimental technology. It is becoming a major issue for bioinformatics scientists to find an efficient method for retrieving and visualizing the protein structures. In this paper, we present a novel approach that uses the dihedral information of a specific protein to query the spatial structures from public databases. Furthermore, we implemented the visualization of the dihedral information of the queried database.

Published in:

Bioinformatics and Biomedicine Workshops (BIBMW), 2012 IEEE International Conference on

Date of Conference:

4-7 Oct. 2012