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Cloud computing model and implementation of molecular dynamics simulation using Amber and Gromacs

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2 Author(s)
Wibisono, A. ; Fac. of Comput. Sci., Univ. Indonesia, Depok, Indonesia ; Suhartanto, H.

Molecular dynamics simulation is a simulation modeling of proteins and some chemical compounds in the pharmaceutical field. Molecular dynamics simulations are used as a way for drug discovery. This paper is going to propose about cloud computing model of molecular dynamics simulations using Amber and Gromacs. Cloud computing applications can be used as a bridge between molecular dynamics applications running on parallel computing and a multiplatform client, so that end-users can use the applications of molecular dynamics simulations easily.

Published in:

Advanced Computer Science and Information Systems (ICACSIS), 2012 International Conference on

Date of Conference:

1-2 Dec. 2012