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HMMlib: A C++ Library for General Hidden Markov Models Exploiting Modern CPUs

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4 Author(s)
Andreas Sand ; Bioinf. Res. Centre, Aarhus Univ., Aarhus, Denmark ; Christian N. S. Pedersen ; Thomas Mailund ; Asbjorn Tolbol Brask

We present a C++ library for constructing and analyzing general hidden Markov models. The library consists of a number of template classes and generic functions, parameterized with the precision of floating point types and different types of hardware acceleration.

Published in:

Parallel and Distributed Methods in Verification, 2010 Ninth International Workshop on, and High Performance Computational Systems Biology, Second International Workshop on

Date of Conference:

Sept. 30 2010-Oct. 1 2010