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Parallelizing an Information Theoretic Co-clustering Algorithm Using a Cloud Middleware

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5 Author(s)
Ramanathan, V. ; Dept. of Comput. Sci. & Eng., Ohio State Univ., Columbus, OH, USA ; Wenjing Ma ; Ravi, V.T. ; Tantan Liu
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The emerging cloud environments are well suited for storage and analysis of large datasets, since they can allow on-demand access to resources. However, developing high-performance implementations of data analysis tasks is a challenging problem. In our prior work, we have developed a middleware called FREERIDE (FRamework for Rapid Implementation of Data mining Engines). FREERIDE is based upon the observation that the processing structure of a large number of data mining algorithms involves generalized reductions. FREERIDE offers a high-level interface and implements both distributed memory and shared memory parallelization. In this paper, we consider a challenging new data mining algorithm, information theoretic co-clustering, and parallelize it using the FREERIDE middleware. We show how the main processing loops of row clustering and column clustering of the Co-clustering algorithm can essentially be fit into a generalized reduction structure. We achieve good parallel efficiency, with a speedup of nearly 21 on 32 cores.

Published in:

Data Mining Workshops (ICDMW), 2010 IEEE International Conference on

Date of Conference:

13-13 Dec. 2010