By Topic

Extending the Data Model for Data-Centric Metagenomics Analysis Using Scientific Workflows in CAMERA

Sign In

Cookies must be enabled to login.After enabling cookies , please use refresh or reload or ctrl+f5 on the browser for the login options.

Formats Non-Member Member
$31 $13
Learn how you can qualify for the best price for this item!
Become an IEEE Member or Subscribe to
IEEE Xplore for exclusive pricing!
close button

puzzle piece

IEEE membership options for an individual and IEEE Xplore subscriptions for an organization offer the most affordable access to essential journal articles, conference papers, standards, eBooks, and eLearning courses.

Learn more about:

IEEE membership

IEEE Xplore subscriptions

11 Author(s)
Altintas, I. ; San Diego Supercomput. Center, Univ. of California, San Diego, La Jolla, CA, USA ; Jing Chen ; Sedova, M. ; Gupta, A.
more authors

Community Cyber infrastructure for Advanced Marine Microbial Ecology Research and Analysis (CAMERA) is an eScience project to enable the microbial ecology community in managing the challenges of metagenomics analysis. CAMERA supports extensive metadata based data acquisition and access, as well as execution of metagenomics experiments through standard and customized scientific workflows. Users can use a wide range of community analysis tools to select and invoke integrated annotation of genomic datasets. Users can also search and sort information based on selected metadata over the underlying semantic database. We present the semantic data model of CAMERA and its integration with scientific workflow execution information. We also describe how this model is used to interlink related workflows, where outputs of previous workflow executions can be used as inputs by subsequent workflow executions. We demonstrate the effectiveness of our model and approach through scenarios built on currently supported CAMERA workflows and analysis.

Published in:

e-Science Workshops, 2010 Sixth IEEE International Conference on

Date of Conference:

7-10 Dec. 2010