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With the economic globalization, Chinese equipment manufacturing enterprises are facing more severe challenges. This paper aims to develop a scientific evaluation system for evaluating independent innovation capability (IIC) of Chinese equipment manufacturing enterprises by using fuzzy theory. The IIC of equipment manufacturing enterprise is divided into four aspects, which are independent innovation input capability, independent innovation output capability, independent innovation management capability, and independent innovation marketing capability. Finally, the application of this method is proved to be effective and feasible by a practical example.