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Aiming at the problem of higher false positive and missing report rate in network intrusion detection, an intrusion detection method based on clustering algorithm is proposed in this paper. This method applies Fuzzy C-means clustering Algorithm to the detection of network intrusion. Through the building of intrusion detection model, carries out fuzzy partition and the clustering of data, and this will detach normal data and attack data effectively. The experiment shows the feasibility and validity of Fuzzy C-means clustering algorithm.