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Querying genomic database by using a parallel logic programming system on distributed computing environment

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1 Author(s)
Matsuda, H. ; Dept. of Inf. & Comput. Sci., Osaka Univ., Japan

We have developed a genomic database system on a network of workstations. The efficient access to genomic databases is crucial, given the enormous increase in sequence data. By using a logic programming language, the system allows a user to perform adaptable data retrieval of integrated data objects in a single declarative framework. In addition by utilizing data-parallel processing, it provides efficient access to a large amount of genomic data in a distributed computing environment. We present the implementation of the database system and its performance by measuring processing times for querying molecular sequence data

Published in:

Communications, Computers, and Signal Processing, 1995. Proceedings., IEEE Pacific Rim Conference on

Date of Conference:

17-19 May 1995