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In this paper, two methods of designing controller for a practical MIMO Flow-Level pilot plant are achieved. Since the open loop plant is unstable, it is stabilized by using inner controller. Then the stabilized plant is identified at different operating points. A nominal model which is non-minimum phase is selected. This system has two outputs which have completely different time constants. Therefore, the identification problem is difficult. The other problem associated with the system is the time delay that is one of the characteristics of the process plants. The transfer function of system is close to triangular and the RGA matrix of plant is close to the identity matrix. Hence, decentralized control can be a good selection for this system which is used in our work. The robustness of the system with decentralized controller is also checked. Two Hinfin, robust controllers based on the knowledge of the disturbance are derived and the results are compared to the results of the decentralized one. To have a good robust performance the mu-synthesis and DK-iteration approach is used.