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A case study of instant workbench for InterProScan by Knoppix high throughput computing edition

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4 Author(s)
F. Konishi ; RIKEN GSC, Adv. Genome Inf. Technol. Res. Group, Japan ; S. Ohki ; Y. Hamano ; M. Ishii

We have developed an instant environment for protein sequence profile scanning application by re-mastering Knoppix distribution as high throughput computing edition. This is an integrated environment with bioinformatics applications, parallel file system and scheduler. The integrated environment allows biology researchers to perform scanning applications immediately on their computational pool without any system configuration changed.

Published in:

HPDC-14. Proceedings. 14th IEEE International Symposium on High Performance Distributed Computing, 2005.

Date of Conference:

24-27 July 2005