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Current methods for modeling, analysis, and design of cyber-physical systems lack a unifying framework due to the complexity and heterogeneity of the constituent elements and their interactions. Our approach is to define relationships between system models at the architectural level, which captures the structural interdependencies and some semantic interdependencies between representations without attempting to comprehend all of the details of any particular modeling formalism. This paper addresses the issue of defining and evaluating consistency between architectural views imposed by various heterogeneous models and a base architecture (BA) for the complete system. This notion of structural consistency ensures that the model elements adhere to the cyber and physical types and the connections between components present in the BA, which serves as the unifying framework for model-based development. Consistency checking between a model and the underlying system architecture is formulated as a typed graph matching problem between the connectivity graphs of the corresponding architectural view and the system's BA. The usefulness of the approach to check system modeling assumptions is illustrated in the context of two heterogeneous views of a quad rotor air vehicle.